hub RLBase (RL Regions)
shortLabel R-loop database (RL Regions)
longLabel A web database for R-loops and R-loop mapping experiments (RL Regions)
useOneFile on
email millerh1@uthscsa.edu

genome hg38

track S96_signal
type bigWig
shortLabel Consensus signal (S96)
longLabel Consensus R-loop signal (S96)
visibility show
bigDataUrl https://rlbase-data.s3.amazonaws.com/misc/rlregions_S96.bw
html https://rlbase-data.s3.amazonaws.com/misc/RLBase_TrackHub/S96.bw.html
color 209,86,77
priority 1
autoScale on
smoothingWindow 8
windowingFunction mean
maxHeightPixels 100:40:8

track dRNH_signal
type bigWig
shortLabel Consensus signal (dRNH)
longLabel Consensus R-loop signal (dRNH)
visibility show
bigDataUrl https://rlbase-data.s3.amazonaws.com/misc/rlregions_dRNH.bw
html https://rlbase-data.s3.amazonaws.com/misc/RLBase_TrackHub/dRNH.bw.html
color 83,157,166
priority 2
autoScale on
smoothingWindow 8
windowingFunction mean
maxHeightPixels 100:40:8

track S96_peaks
type bigNarrowPeak
shortLabel Consensus peaks (S96)
longLabel Consensus R-loop peaks (S96)
visibility show
bigDataUrl https://rlbase-data.s3.amazonaws.com/misc/rlregions_S96.bb
html https://rlbase-data.s3.amazonaws.com/misc/RLBase_TrackHub/S96.bb.html
color 209,86,77
priority 2
autoScale on
smoothingWindow 8
windowingFunction mean
maxHeightPixels 100:40:8

track dRNH_peaks
type bigNarrowPeak
shortLabel Consensus peaks (dRNH)
longLabel Consensus R-loop peaks (dRNH)
visibility show
bigDataUrl https://rlbase-data.s3.amazonaws.com/misc/rlregions_dRNH.bb
html https://rlbase-data.s3.amazonaws.com/misc/RLBase_TrackHub/dRNH.bb.html
color 83,157,166
priority 2
autoScale on
smoothingWindow 8
windowingFunction mean
maxHeightPixels 100:40:8

track RLRegions
type bigBed 9
shortLabel RL Regions
longLabel RL Regions (RLBase v1)
visibility show
bigDataUrl https://rlbase-data.s3.amazonaws.com/misc/rlregions_table.bb
html https://rlbase-data.s3.amazonaws.com/misc/RLBase_TrackHub/rlregions_table.bb.html
itemRgb on
priority 1
windowingFunction mean
maxHeightPixels 100:40:8

track RLFS
type bigBed
shortLabel RLFS
longLabel R-loop forming sequences (QmRLFS-Finder.py)
visibility show
bigDataUrl https://rlbase-data.s3.amazonaws.com/misc/rlfs_hg38.bb
html https://rlbase-data.s3.amazonaws.com/misc/RLBase_TrackHub/rlfs_hg38.bb.html
color 115,50,168
priority 1
autoScale on
smoothingWindow 8
windowingFunction mean
maxHeightPixels 100:40:8